Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816649.1_cds_XP_016498897.1_12873
CDS Infomation

[gene=LOC107817558] [db_xref=GeneID:107817558] [protein=BTB/POZ domain-containing protein At5g03250-like] [partial=3'] [protein_id=XP_016498897.1] [location=join(5814..5872,8403..8472,9081..10307,10458..>10778)] [gbkey=CDS]
Sequence

ATGGCATGCAAGAAGTTAGGATTCAAGTCTGAGGTTTTTCATCTTGATGGCCAATCATGG
ATCTGCTCTACAGGACTTCCGAGTGATGTTGTTGTTGAAGTTGGAGACACATCCTTTCAT
CTACATAAGTTTCCCTTGTTGTCTAGAAGCAGGCTCTTAGAGAAGCTTATACAAGATTCT
TCTGAACAGGAGAAGAATGAGAAACTTTGTGTTTTGCATCTTCACGGGATACCTGGTAGA
GCAAAAGCATTCTTGAAAGTCGCCAAGTTCTGTTATGGCGTCAAGATGGAACTCACAGCG
CGCAATGTTGTCAGCCTTAGATGTGCAGCCGAATATCTTCAGATGAATGAAGATTATGGA
GAAGGAAACCTCATTGCACAGACAGAGAGTTTTCTCATTGAAGTTTTTGGTTTTTGGACG
GACACTTTTAAAGCCTTAGAGACATGCGAAGATGTTCTTCCATGGGCGGAAGAGCTTCAC
ATTGTCTCAAGGTGCATAGATTCCCTGTCAACGAAAGCGTGTGCTGACCCAACTTTACTA
AGTTGGCCTGTGGCTGGTCAGAGCCAAGATGATGCTTTTGCTTGGAATGGAATACATGCA
AGTGGTGCGGCTTCTAAACAATGTCCGCTGAATGAGGACTGGTGGTATGAAGATGTGTCC
TTCCTTAAACAGCATATTTATAGAAAACTAATCCTTGCTGTTAGTGCTAGGGGCATGACA
CCGGAGAGAATCGCTGGTTCCCTAATTTTCTATGCTAAGAAACACCTTCCTCTTAACGGT
AGGCAATCAAATTTCCAGAAACACAATGGTGCAGTTCCAGGATCAACCCTTCCTGCTGCA
TCTGATGCAGATCAAAGGACTCTTCTTGAAGAGATTGTGGCGTTACTACCCGAGCAAAAG
GGCTTCATACCTACCAAGTTTCTGCTTAGGCTTCTTAAAACATCAATGATCCTAGATGCT
AGTAAATCATCCCGAGAGAATCTGGAGAGAAGGGTTGGGGCTCAGTTAGATGAAGCAGCT
TTAGAAGATATTCTCATACCAAATATGGGCCACACTGTGGAGACCCTATATGATATAGAC
TGCATTCAGCGAATGGTTGATCACTTCATGATGGCTGATCAGGACGAAATTGAACCTACC
TCCAATGAACTGATAAATGAAGGCCAGTTAGTTGGAGGATCGCACTCACTAGCCCCGCTG
ACAATTGTAGCTAATCTTGTAGACGGCTACCTCGCAGAAGTGGCGCCTGATACTAACTTG
AAGTTAACTAAATTTAACGCGCTAGCTTCAGCAATCCCAGGGTATGCCAGACCATTGGAT
GATGGTATCTACCGTGCAATTGACATATACCTCAAGGCACATTCCTGGCTGACGGGGTCG
GAGAGGGAACAACTTTGCAGGGTCATGAACTGCCAGAAGCTGTCCTTAGAAGCAAGTACT
CATGCAGCACAGAACGAAAGACTACCTCTACGAGTTATTGTCCAAGTTCTATTCTTTGAG
CAACTCCGGCTCCGCACTTCTGTGGCTGGTTGGCTCTTTGTCTCAGACAACCTTGACAAT
TCACAAAGCCTGAGTGGTAATTTAGTCATTGAAGGCACCAGGGCGGACCAACTTGTGACA
TTTGATGACATGAGAGATCGAGTTCGTTCACTTGAGAAAGAGTGCTTGAACATGAAA

Peptide Sequence

PEP ID

XP_016498897.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein At5g03250-like, partial [Nicotiana tabacum]
Sequence

MACKKLGFKSEVFHLDGQSWICSTGLPSDVVVEVGDTSFHLHKFPLLSRSRLLEKLIQDS
SEQEKNEKLCVLHLHGIPGRAKAFLKVAKFCYGVKMELTARNVVSLRCAAEYLQMNEDYG
EGNLIAQTESFLIEVFGFWTDTFKALETCEDVLPWAEELHIVSRCIDSLSTKACADPTLL
SWPVAGQSQDDAFAWNGIHASGAASKQCPLNEDWWYEDVSFLKQHIYRKLILAVSARGMT
PERIAGSLIFYAKKHLPLNGRQSNFQKHNGAVPGSTLPAASDADQRTLLEEIVALLPEQK
GFIPTKFLLRLLKTSMILDASKSSRENLERRVGAQLDEAALEDILIPNMGHTVETLYDID
CIQRMVDHFMMADQDEIEPTSNELINEGQLVGGSHSLAPLTIVANLVDGYLAEVAPDTNL
KLTKFNALASAIPGYARPLDDGIYRAIDIYLKAHSWLTGSEREQLCRVMNCQKLSLEAST
HAAQNERLPLRVIVQVLFFEQLRLRTSVAGWLFVSDNLDNSQSLSGNLVIEGTRADQLVT
FDDMRDRVRSLEKECLNMK

Transcript Sequence

Gene sequence data has not been registered.